dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002363_15|CGC4
Gene ID: MGYG000002363_03781
Location and strand information: 316899 - 317789 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000002363_15|CGC4
Gene ID: MGYG000002363_03782
Location and strand information: 317782 - 318684 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002363_15|CGC4
Gene ID: MGYG000002363_03783
Location and strand information: 318697 - 319824 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Trehalose import ATP-binding protein SugC

Gene clsuter ID: MGYG000002363_15|CGC4
Gene ID: MGYG000002363_03784
Location and strand information: 319841 - 321127 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Putative ABC transporter substrate-binding protein YesO

Gene clsuter ID: MGYG000002363_15|CGC4
Gene ID: MGYG000002363_03785
Location and strand information: 321192 - 322319 (+)
Family: PL22_1|PL22
Protein type: CAZyme
Protein description: Oligogalacturonate lyase
Protein isoelectric point: 6.498
Protein molecular weight: 43368.62
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002363_15|CGC4
Gene ID: MGYG000002363_03786
Location and strand information: 322430 - 323773 (-)
Family: 1.B.15.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002363_15|CGC4
Gene ID: MGYG000002363_03787
Location and strand information: 324012 - 325445 (-)
Family: GH32
Protein type: CAZyme
Protein description: Sucrose-6-phosphate hydrolase
Protein isoelectric point: 4.9748
Protein molecular weight: 54616.3
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002363_15|CGC4
Gene ID: MGYG000002363_03788
Location and strand information: 325464 - 326705 (-)
Family: 2.A.1.5.2
Protein type: TC
Protein description: Sucrose permease

Gene clsuter ID: MGYG000002363_15|CGC4
Gene ID: MGYG000002363_03789
Location and strand information: 326951 - 327946 (+)
Family: LacI
Protein type: TF
Protein description: Catabolite control protein A

Gene clsuter ID: MGYG000002363_15|CGC4
Gene ID: MGYG000002363_03790
Location and strand information: 327947 - 329365 (-)
Family: 2.A.1.1.2
Protein type: TC
Protein description: Arabinose-proton symporter

Gene clsuter ID: MGYG000002363_15|CGC4
Gene ID: MGYG000002363_03791
Location and strand information: 329742 - 330503 (-)
Family: null
Protein type: null
Protein description: 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase

Gene clsuter ID: MGYG000002363_15|CGC4
Gene ID: MGYG000002363_03792
Location and strand information: 331040 - 332215 (+)
Family: PL22_1|PL22
Protein type: CAZyme
Protein description: Oligogalacturonate lyase
Protein isoelectric point: 5.6332
Protein molecular weight: 44340.6
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002363_15|CGC4
Gene ID: MGYG000002363_03793
Location and strand information: 332500 - 333195 (-)
Family: 1.B.35.1.7
Protein type: TC
Protein description: Oligogalacturonate-specific porin KdgM

Gene clsuter ID: MGYG000002363_15|CGC4
Gene ID: MGYG000002363_03794
Location and strand information: 333449 - 334627 (-)
Family: null
Protein type: null
Protein description: Acetyl-CoA acetyltransferase

Gene clsuter ID: MGYG000002363_15|CGC4
Gene ID: MGYG000002363_03795
Location and strand information: 334733 - 335614 (-)
Family: HTH_1
Protein type: TF
Protein description: HTH-type transcriptional regulator HdfR

Gene clsuter ID: MGYG000002363_15|CGC4
Gene ID: MGYG000002363_03796
Location and strand information: 335755 - 336216 (+)
Family: 2.A.117.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002363_15|CGC4
Gene ID: MGYG000002363_03797
Location and strand information: 336350 - 337579 (+)
Family: 2.A.42.2.5
Protein type: TC
Protein description: Inner membrane transport protein YqeG

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002363_03785	PL22_e0\|4.2.2.6	pectin
MGYG000002363_03787	GH32_e63\|3.2.1.26	fructan
MGYG000002363_03792	PL22_e0\|4.2.2.6	pectin

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002363_03781	Lactose transport system permease protein LacF	TC	316899	317789	+	3.A.1.1.11
MGYG000002363_03782	L-arabinose transport system permease protein AraQ	TC	317782	318684	+	3.A.1.1.11
MGYG000002363_03783	Trehalose import ATP-binding protein SugC	TC	318697	319824	+	3.A.1.1.11
MGYG000002363_03784	Putative ABC transporter substrate-binding protein YesO	TC	319841	321127	+	3.A.1.1.11
MGYG000002363_03785	Oligogalacturonate lyase	CAZyme	321192	322319	+	PL22_1\| PL22
MGYG000002363_03786	hypothetical protein	TC	322430	323773	-	1.B.15.1.1
MGYG000002363_03787	Sucrose-6-phosphate hydrolase	CAZyme	324012	325445	-	GH32
MGYG000002363_03788	Sucrose permease	TC	325464	326705	-	2.A.1.5.2
MGYG000002363_03789	Catabolite control protein A	TF	326951	327946	+	LacI
MGYG000002363_03790	Arabinose-proton symporter	TC	327947	329365	-	2.A.1.1.2
MGYG000002363_03791	2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase	null	329742	330503	-	adh_short_C2
MGYG000002363_03792	Oligogalacturonate lyase	CAZyme	331040	332215	+	PL22_1\| PL22
MGYG000002363_03793	Oligogalacturonate-specific porin KdgM	TC	332500	333195	-	1.B.35.1.7
MGYG000002363_03794	Acetyl-CoA acetyltransferase	null	333449	334627	-	Thiolase_N\| Thiolase_C
MGYG000002363_03795	HTH-type transcriptional regulator HdfR	TF	334733	335614	-	HTH_1
MGYG000002363_03796	hypothetical protein	TC	335755	336216	+	2.A.117.1.3
MGYG000002363_03797	Inner membrane transport protein YqeG	TC	336350	337579	+	2.A.42.2.5
Protein ID	Protein Name	Type	Start	End	Strand	Signature